💊 Gènes de Résistance (AMRFinder) : Ecoli

Protein id Contig id Start Stop Strand Element symbol Element name Scope Type Subtype Class Subclass Method Target length Reference sequence length % Coverage of reference % Identity to reference Alignment length Closest reference accession Closest reference name HMM accession HMM description
NA contig00009 3 488 - sul2 sulfonamide-resistant dihydropteroate synthase Sul2 core AMR AMR SULFONAMIDE SULFONAMIDE PARTIAL_CONTIG_ENDX 162 271 59.78 100.00 162 WP_001043260.1 sulfonamide-resistant dihydropteroate synthase Sul2 NA NA
NA contig00009 20866 21738 - blaCTX-M-55 extended-spectrum class A beta-lactamase CTX-M-55 core AMR AMR BETA-LACTAM CEPHALOSPORIN ALLELEX 291 291 100.00 100.00 291 WP_015387340.1 extended-spectrum class A beta-lactamase CTX-M-55 NA NA
NA contig00033 8965 10587 - mcr-1.1 phosphoethanolamine--lipid A transferase MCR-1.1 core AMR AMR COLISTIN COLISTIN ALLELEX 541 541 100.00 100.00 541 WP_049589868.1 phosphoethanolamine--lipid A transferase MCR-1.1 NA NA
NA contig00089 1229 2392 + tet(A) tetracycline efflux MFS transporter Tet(A) core AMR AMR TETRACYCLINE TETRACYCLINE BLASTX 388 399 97.24 99.74 388 WP_000804063.1 tetracycline efflux MFS transporter Tet(A) NA NA
NA contig00092 14 847 - aph(6)-Id aminoglycoside O-phosphotransferase APH(6)-Id core AMR AMR AMINOGLYCOSIDE STREPTOMYCIN EXACTX 278 278 100.00 100.00 278 WP_000480968.1 aminoglycoside O-phosphotransferase APH(6)-Id NA NA
NA contig00092 850 1650 - aph(3'')-Ib aminoglycoside O-phosphotransferase APH(3'')-Ib core AMR AMR AMINOGLYCOSIDE STREPTOMYCIN EXACTX 267 267 100.00 100.00 267 WP_001082319.1 aminoglycoside O-phosphotransferase APH(3'')-Ib NA NA
NA contig00096 68 970 + mph(A) Mph(A) family macrolide 2'-phosphotransferase core AMR AMR MACROLIDE AZITHROMYCIN/ERYTHROMYCIN/SPIRAMYCIN/TELITHROMYCIN BLASTX 301 301 100.00 99.67 301 WP_000219391.1 Mph(A) family macrolide 2'-phosphotransferase NA NA
NA contig00104 149 1006 - blaTEM-1 broad-spectrum class A beta-lactamase TEM-1 core AMR AMR BETA-LACTAM BETA-LACTAM ALLELEX 286 286 100.00 100.00 286 WP_000027057.1 broad-spectrum class A beta-lactamase TEM-1 NA NA